BS-seq in plasma of CRC patients

We performed whole genome bisulfite sequencing of plasma DNA in 11 colorectal cancer patients to study the colonic DNA in plasma.

1 Dataset 2 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001004568	We performed whole genome bisulfite sequencing of plasma DNA in 11 colorectal cancer patients to study the colonic DNA in plasma.	Illumina HiSeq 2500	17

Publications	Citations
Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin. Sun K, Jiang P, Cheng SH, Cheng THT, Wong J, Wong VWS, Ng SSM, Ma BBY, Leung TY, Chan SL, Mok TSK, Lai PBS, Chan HLY, Sun H, Chan KCA, Chiu RWK, Lo YMD. Genome Res 29: 2019 418-427	108
OCRDetector: Accurately Detecting Open Chromatin Regions via Plasma Cell-Free DNA Sequencing Data. Wang J, Chen L, Zhang X, Tong Y, Zheng T. Int J Mol Sci 22: 2021 5802	4