DNA-seq from plasma of 14 liver transplantation patients

We performed DNA sequencing on the plasma of 14 liver transplantation patients to study the liver DNA in the plasma.

1 Dataset 3 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001004590	DNA-seq from plasma of 14 liver transplantation patients	Illumina HiSeq 4000	14

Publications	Citations
Preferred end coordinates and somatic variants as signatures of circulating tumor DNA associated with hepatocellular carcinoma. Jiang P, Sun K, Tong YK, Cheng SH, Cheng THT, Heung MMS, Wong J, Wong VWS, Chan HLY, Chan KCA, Lo YMD, Chiu RWK. Proc Natl Acad Sci U S A 115: 2018 E10925-E10933	96
Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin. Sun K, Jiang P, Cheng SH, Cheng THT, Wong J, Wong VWS, Ng SSM, Ma BBY, Leung TY, Chan SL, Mok TSK, Lai PBS, Chan HLY, Sun H, Chan KCA, Chiu RWK, Lo YMD. Genome Res 29: 2019 418-427	108
OCRDetector: Accurately Detecting Open Chromatin Regions via Plasma Cell-Free DNA Sequencing Data. Wang J, Chen L, Zhang X, Tong Y, Zheng T. Int J Mol Sci 22: 2021 5802	4