EGAD00001002072 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       23 
                      
                   
                     
                       
        		               EGAD00001002073 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       12 
                      
                   
                     
                       
        		               EGAD00001002074 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of WNT reporter of PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       3 
                      
                   
                     
                       
        		               EGAD00001002075 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002076 
        	              
                       
                    		 RNAseq of Patient-derived xenograft derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       19 
                      
                   
                     
                       
        		               EGAD00001002077 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       87 
                      
                   
                     
                       
        		               EGAD00001002078 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       28 
                      
                   
                     
                       
        		               EGAD00001002079 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002080 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       37 
                      
                   
                     
                       
        		               EGAD00001002081 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from Patient-derived xenograft derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       4 
                      
                   
                     
                       
        		               EGAD00001002082 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Blood EDTA 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       69 
                      
                   
                     
                       
        		               EGAD00001002083 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       2 
                      
                   
                     
                       
        		               EGAD00001002084 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       23 
                      
                   
                     
                       
        		               EGAD00001002085 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       12 
                      
                   
                     
                       
        		               EGAD00001002086 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002087 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       19 
                      
                   
                     
                       
        		               EGAD00001002088 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       87 
                      
                   
                     
                       
        		               EGAD00001002089 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       25 
                      
                   
                     
                       
        		               EGAD00001002090 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002091 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       38 
                      
                   
                     
                       
        		               EGAD00001002092 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from Patient-derived xenograft derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       5 
                      
                   
                     
                       
        		               EGAD00001002093 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Blood EDTA 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       33 
                      
                   
                     
                       
        		               EGAD00001002094 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       2 
                      
                   
                     
                       
        		               EGAD00001002095 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       14 
                      
                   
                     
                       
        		               EGAD00001002096 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       12 
                      
                   
                     
                       
        		               EGAD00001002097 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002098 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       19 
                      
                   
                     
                       
        		               EGAD00001002099 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       55 
                      
                   
                     
                       
        		               EGAD00001002100 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       25 
                      
                   
                     
                       
        		               EGAD00001002101 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002102 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       38 
                      
                   
                     
                       
        		               EGAD00001002103 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from Patient-derived xenograft derived from colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       5 
                      
                   
                     
                       
        		               EGAD00001002104 
        	              
                       
                    		 Whole-exome sequencing on AB 5500xl Genetic Analyzer of Blood EDTA 
        	              
                       
        		             
                           
                             AB 5500xl Genetic Analyzer 
                           
                         
                        
                       76 
                      
                   
                     
                       
        		               EGAD00001002105 
        	              
                       
                    		 Whole-exome sequencing on AB 5500xl Genetic Analyzer of colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             AB 5500xl Genetic Analyzer 
                           
                             AB 5500xl-W Genetic Analysis System 
                           
                         
                        
                       16 
                      
                   
                     
                       
        		               EGAD00001002106 
        	              
                       
                    		 Whole-exome sequencing on AB 5500xl Genetic Analyzer of Patient-derived xenograft derived from colorectal cancer metastasis sample 
        	              
                       
        		             
                           
                             AB 5500xl Genetic Analyzer 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001002107 
        	              
                       
                    		 Whole-exome sequencing on AB 5500xl Genetic Analyzer of colorectal cancer primary tumor sample 
        	              
                       
        		             
                           
                             AB 5500xl Genetic Analyzer 
                           
                             AB 5500xl-W Genetic Analysis System 
                           
                         
                        
                       66 
                      
                   
                     
                       
        		               EGAD00001002883 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer sample of a validation cohort of 60 PDX 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       60 
                      
                   
                     
                       
        		               EGAD00001002884 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample at early/late passages 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       8 
                      
                   
                     
                       
        		               EGAD00001003362 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (EPO2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       49 
                      
                   
                     
                       
        		               EGAD00001003363 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (EPO2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       114 
                      
                   
                     
                       
        		               EGAD00001003364 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       4 
                      
                   
                     
                       
        		               EGAD00001003365 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003366 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       10 
                      
                   
                     
                       
        		               EGAD00001003367 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       7 
                      
                   
                     
                       
        		               EGAD00001003368 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003369 
        	              
                       
                    		 RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       13 
                      
                   
                     
                       
        		               EGAD00001003370 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Blood EDTA (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       10 
                      
                   
                     
                       
        		               EGAD00001003371 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003372 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       4 
                      
                   
                     
                       
        		               EGAD00001003373 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003374 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       8 
                      
                   
                     
                       
        		               EGAD00001003375 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       7 
                      
                   
                     
                       
        		               EGAD00001003376 
        	              
                       
                    		 Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       12 
                      
                   
                     
                       
        		               EGAD00001003377 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Blood EDTA (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       10 
                      
                   
                     
                       
        		               EGAD00001003378 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003379 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       4 
                      
                   
                     
                       
        		               EGAD00001003380 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003381 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer metastasis sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       10 
                      
                   
                     
                       
        		               EGAD00001003383 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       7 
                      
                   
                     
                       
        		               EGAD00001003384 
        	              
                       
                    		 Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             Illumina HiSeq 2000 
                           
                         
                        
                       14 
                      
                   
                     
                       
        		               EGAD00001003385 
        	              
                       
                    		 Whole-exome sequencing on AB 5500xl Genetic Analyzer of Blood EDTA (OT2_cohort) 
        	              
                       
        		             
                           
                             AB 5500 Genetic Analyzer 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00001003386 
        	              
                       
                    		 Whole-exome sequencing on AB 5500xl Genetic Analyzer of colorectal cancer primary tumor sample (OT2_cohort) 
        	              
                       
        		             
                           
                             AB 5500 Genetic Analyzer 
                           
                         
                        
                       1 
                      
                   
                     
                       
        		               EGAD00010001161 
        	              
                       
                    		 Oncotrack metastatic samples using 450K. The shared AF analysis files oncotrackDNAmAnalysis.R and oncotrackDNAmBetaScores.txt which were applied for both Oncotrack_450K_tumor (EGAD00010001162) and Oncotrack_450K_metastatic (EGAD00010001161) datasets are included on Oncotrack_450K_tumor (EGAD00010001162) dataset. 
        	              
                       
        		             
                           
                             Illumina 450K 
                           
                         
                        
                       15 
                      
                   
                     
                       
        		               EGAD00010001162 
        	              
                       
                    		 Oncotrack primary tumor samples using 450K. The dataset includes shared AF analysis files oncotrackDNAmAnalysis.R and oncotrackDNAmBetaScores.txt which were applied for both Oncotrack_450K_tumor (EGAD00010001162) and Oncotrack_450K_metastatic (EGAD00010001161) datasets. 
        	              
                       
        		             
                           
                             Illumina 450K 
                           
                         
                        
                       67