Integrated analysis of whole genome and RNA sequencing in 22 HBV-associated HCCs

RIKEN collection WGS and RNA-seq reads for 66 HBV-associated HCC and matched blood or liver samples from 22 donors.

15/08/2016
66 samples
DAC: EGAC00001000010
Technologies: Illumina Genome Analyzer IIx, Illumina HiSeq 2000

Access Policy1 Study Files

Metadata

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HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.

ICGC Data Access

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001000678	WGS of liver cancer in the Japanese population	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00000494541	txt.bz2	5.9 GB
EGAF00000494542	txt.bz2	5.9 GB
EGAF00000494543	txt.bz2	2.8 GB
EGAF00000494544	txt.bz2	2.9 GB
EGAF00000494551	txt.bz2	6.6 GB
EGAF00000494552	txt.bz2	6.6 GB
EGAF00000494553	txt.bz2	6.6 GB
EGAF00000494554	txt.bz2	6.6 GB
EGAF00000494589	txt.bz2	6.9 GB
EGAF00000494590	txt.bz2	7.0 GB
EGAF00000494591	txt.bz2	6.5 GB
EGAF00000494592	txt.bz2	6.6 GB
EGAF00000494593	txt.bz2	2.7 GB
EGAF00000494594	txt.bz2	2.7 GB
EGAF00000494599	txt.bz2	6.0 GB
EGAF00000494600	txt.bz2	6.1 GB
EGAF00000494605	txt.bz2	3.2 GB
EGAF00000494606	txt.bz2	3.4 GB
EGAF00000494611	txt.bz2	2.7 GB
EGAF00000494612	txt.bz2	2.8 GB
EGAF00000494619	txt.bz2	6.0 GB
EGAF00000494620	txt.bz2	6.1 GB
EGAF00000494621	txt.bz2	2.8 GB
EGAF00000494622	txt.bz2	2.9 GB
EGAF00000494623	txt.bz2	6.0 GB
EGAF00000494624	txt.bz2	6.1 GB
EGAF00000501995	fastq.bz2	10.3 GB
EGAF00000501996	fastq.bz2	10.4 GB
EGAF00000501997	fastq.bz2	7.1 GB
EGAF00000501998	fastq.bz2	7.2 GB
EGAF00000502003	fastq.bz2	11.8 GB
EGAF00000502004	fastq.bz2	11.9 GB
EGAF00000502011	txt.bz2	1.9 GB
EGAF00000502012	txt.bz2	1.9 GB
EGAF00000502023	txt.bz2	1.9 GB
EGAF00000502024	txt.bz2	1.9 GB
EGAF00000502055	fastq.bz2	25.1 GB
EGAF00000502056	fastq.bz2	25.5 GB
EGAF00000502063	txt.bz2	2.8 GB
EGAF00000502064	txt.bz2	2.9 GB
EGAF00000502071	fastq.bz2	13.4 GB
EGAF00000502072	fastq.bz2	13.6 GB
EGAF00000502073	fastq.bz2	11.3 GB
EGAF00000502074	fastq.bz2	11.3 GB
EGAF00000502081	fastq.bz2	8.9 GB
EGAF00000502082	fastq.bz2	8.6 GB
EGAF00000502083	txt.bz2	3.3 GB
EGAF00000502084	txt.bz2	3.4 GB
EGAF00000502089	txt.bz2	2.8 GB
EGAF00000502090	txt.bz2	2.9 GB
EGAF00000502093	txt.bz2	1.9 GB
EGAF00000502094	txt.bz2	1.9 GB
EGAF00000502095	txt.bz2	2.1 GB
EGAF00000502096	txt.bz2	2.1 GB
EGAF00000502099	txt.bz2	6.0 GB
EGAF00000502100	txt.bz2	6.0 GB
EGAF00000502123	txt.bz2	2.9 GB
EGAF00000502124	txt.bz2	3.0 GB
EGAF00000502149	txt.bz2	1.9 GB
EGAF00000502150	txt.bz2	2.0 GB
EGAF00000502165	txt.bz2	3.3 GB
EGAF00000502166	txt.bz2	1.9 GB
EGAF00000502173	txt.bz2	5.2 GB
EGAF00000502174	txt.bz2	5.2 GB
EGAF00000502187	txt.bz2	6.2 GB
EGAF00000502188	txt.bz2	6.4 GB
EGAF00000502193	fastq.bz2	12.8 GB
EGAF00000502194	fastq.bz2	12.9 GB
EGAF00000502195	txt.bz2	3.3 GB
EGAF00000502196	txt.bz2	1.9 GB
EGAF00000502199	txt.bz2	2.9 GB
EGAF00000502200	txt.bz2	3.0 GB
EGAF00000502223	fastq.bz2	11.7 GB
EGAF00000502224	fastq.bz2	11.8 GB
EGAF00000502225	txt.bz2	3.3 GB
EGAF00000502226	txt.bz2	1.9 GB
EGAF00000502227	fastq.bz2	12.3 GB
EGAF00000502228	fastq.bz2	12.5 GB
EGAF00000502251	fastq.bz2	27.0 GB
EGAF00000502252	fastq.bz2	27.1 GB
EGAF00000502253	txt.bz2	2.8 GB
EGAF00000502254	txt.bz2	2.9 GB
EGAF00000502277	txt.bz2	5.1 GB
EGAF00000502278	txt.bz2	5.2 GB
EGAF00000502287	txt.bz2	1.8 GB
EGAF00000502288	txt.bz2	1.9 GB
EGAF00000502303	txt.bz2	2.8 GB
EGAF00000502304	txt.bz2	2.9 GB
EGAF00000502321	txt.bz2	5.8 GB
EGAF00000502322	txt.bz2	6.0 GB
EGAF00000502323	txt.bz2	6.0 GB
EGAF00000502324	txt.bz2	6.0 GB
EGAF00000502333	fastq.bz2	12.6 GB
EGAF00000502334	fastq.bz2	12.7 GB
EGAF00000502345	txt.bz2	3.3 GB
EGAF00000502346	txt.bz2	3.4 GB
EGAF00000502351	txt.bz2	3.4 GB
EGAF00000502352	txt.bz2	1.9 GB
EGAF00000502357	fastq.bz2	24.9 GB
EGAF00000502358	fastq.bz2	25.1 GB
EGAF00000502363	fastq.bz2	26.3 GB
EGAF00000502364	fastq.bz2	26.3 GB
EGAF00000502365	txt.bz2	3.4 GB
EGAF00000502366	txt.bz2	1.9 GB
EGAF00000502371	txt.bz2	2.9 GB
EGAF00000502372	txt.bz2	2.9 GB
EGAF00000502379	fastq.bz2	13.7 GB
EGAF00000502380	fastq.bz2	13.7 GB
EGAF00000502409	txt.bz2	5.2 GB
EGAF00000502410	txt.bz2	5.3 GB
EGAF00000502447	txt.bz2	3.2 GB
EGAF00000502448	txt.bz2	3.4 GB
EGAF00000502465	txt.bz2	6.0 GB
EGAF00000502466	txt.bz2	6.0 GB
EGAF00000502467	txt.bz2	2.8 GB
EGAF00000502468	txt.bz2	2.9 GB
EGAF00000502481	fastq.bz2	11.3 GB
EGAF00000502482	fastq.bz2	11.8 GB
EGAF00000502491	fastq.bz2	11.1 GB
EGAF00000502492	fastq.bz2	11.3 GB
EGAF00000502495	txt.bz2	3.3 GB
EGAF00000502496	txt.bz2	1.9 GB
EGAF00000502511	fastq.bz2	12.3 GB
EGAF00000502512	fastq.bz2	12.5 GB
EGAF00000502557	txt.bz2	1.9 GB
EGAF00000502558	txt.bz2	1.9 GB
EGAF00000502569	txt.bz2	2.1 GB
EGAF00000502570	txt.bz2	2.1 GB
EGAF00000502587	fastq.bz2	28.8 GB
EGAF00000502588	fastq.bz2	29.6 GB
EGAF00000502591	txt.bz2	3.2 GB
EGAF00000502592	txt.bz2	1.8 GB
EGAF00000502597	fastq.bz2	22.6 GB
EGAF00000502598	fastq.bz2	22.6 GB
EGAF00000502601	txt.bz2	1.9 GB
EGAF00000502602	txt.bz2	2.0 GB
EGAF00000502613	fastq.bz2	10.9 GB
EGAF00000502614	fastq.bz2	11.2 GB
EGAF00000502619	fastq.bz2	10.3 GB
EGAF00000502620	fastq.bz2	10.4 GB
EGAF00000502639	fastq.bz2	11.7 GB
EGAF00000502640	fastq.bz2	12.1 GB
EGAF00000502649	fastq.bz2	11.6 GB
EGAF00000502650	fastq.bz2	12.0 GB
EGAF00000502679	fastq.bz2	12.3 GB
EGAF00000502680	fastq.bz2	12.2 GB
EGAF00000502693	fastq.bz2	11.1 GB
EGAF00000502694	fastq.bz2	11.3 GB
EGAF00000502717	txt.bz2	3.4 GB
EGAF00000502718	txt.bz2	1.9 GB
EGAF00000502737	fastq.bz2	38.8 GB
EGAF00000502738	fastq.bz2	38.8 GB
EGAF00000502741	fastq.bz2	39.5 GB
EGAF00000502742	fastq.bz2	40.0 GB
EGAF00000502745	txt.bz2	2.1 GB
EGAF00000502746	txt.bz2	2.1 GB
EGAF00000502753	txt.bz2	5.2 GB
EGAF00000502754	txt.bz2	5.2 GB
EGAF00000502755	fastq.bz2	13.5 GB
EGAF00000502756	fastq.bz2	13.7 GB
EGAF00000502759	fastq.bz2	9.5 GB
EGAF00000502760	fastq.bz2	9.7 GB
EGAF00000652375	fastq.bz2	3.9 GB
EGAF00000652376	fastq.bz2	4.0 GB
EGAF00000652377	fastq.bz2	4.1 GB
EGAF00000652378	fastq.bz2	4.1 GB
EGAF00000652379	fastq.bz2	3.0 GB
EGAF00000652380	fastq.bz2	3.0 GB
EGAF00000652381	fastq.bz2	4.1 GB
EGAF00000652382	fastq.bz2	4.2 GB
EGAF00000652383	fastq.bz2	3.4 GB
EGAF00000652384	fastq.bz2	3.5 GB
EGAF00000652385	fastq.bz2	3.0 GB
EGAF00000652386	fastq.bz2	3.0 GB
EGAF00000652387	fastq.bz2	4.5 GB
EGAF00000652388	fastq.bz2	4.5 GB
EGAF00000652389	fastq.bz2	3.6 GB
EGAF00000652390	fastq.bz2	3.6 GB
EGAF00000652391	fastq.bz2	1.6 GB
EGAF00000652392	fastq.bz2	1.6 GB
EGAF00000652393	fastq.bz2	2.0 GB
EGAF00000652394	fastq.bz2	2.1 GB
EGAF00000652395	fastq.bz2	2.7 GB
EGAF00000652396	fastq.bz2	2.7 GB
EGAF00000652397	fastq.bz2	3.1 GB
EGAF00000652398	fastq.bz2	3.2 GB
EGAF00000652399	fastq.bz2	3.2 GB
EGAF00000652400	fastq.bz2	3.2 GB
EGAF00000652401	fastq.bz2	2.1 GB
EGAF00000652402	fastq.bz2	2.1 GB
EGAF00000652403	fastq.bz2	5.3 GB
EGAF00000652404	fastq.bz2	5.4 GB
EGAF00000652405	fastq.bz2	2.8 GB
EGAF00000652406	fastq.bz2	2.8 GB
EGAF00000652407	fastq.bz2	5.5 GB
EGAF00000652408	fastq.bz2	5.5 GB
EGAF00000652409	fastq.bz2	4.0 GB
EGAF00000652410	fastq.bz2	4.1 GB
EGAF00000652411	fastq.bz2	5.7 GB
EGAF00000652412	fastq.bz2	5.7 GB
EGAF00000652413	fastq.bz2	2.1 GB
EGAF00000652414	fastq.bz2	2.1 GB
EGAF00000652415	fastq.bz2	2.5 GB
EGAF00000652416	fastq.bz2	2.6 GB
EGAF00000652417	fastq.bz2	1.9 GB
EGAF00000652418	fastq.bz2	1.9 GB
EGAF00000652419	fastq.bz2	2.5 GB
EGAF00000652420	fastq.bz2	2.5 GB
EGAF00000652421	fastq.bz2	3.8 GB
EGAF00000652422	fastq.bz2	3.9 GB
EGAF00000652423	fastq.bz2	3.9 GB
EGAF00000652424	fastq.bz2	4.0 GB
EGAF00000652425	fastq.bz2	6.7 GB
EGAF00000652426	fastq.bz2	6.8 GB
EGAF00000652427	fastq.bz2	2.7 GB
EGAF00000652428	fastq.bz2	2.8 GB
EGAF00000652429	fastq.bz2	3.6 GB
EGAF00000652430	fastq.bz2	3.7 GB
EGAF00000652431	fastq.bz2	2.4 GB
EGAF00000652432	fastq.bz2	2.4 GB
EGAF00000652433	fastq.bz2	2.1 GB
EGAF00000652434	fastq.bz2	2.2 GB
EGAF00000652435	fastq.bz2	2.7 GB
EGAF00000652436	fastq.bz2	2.8 GB
EGAF00000652437	fastq.bz2	2.2 GB
EGAF00000652438	fastq.bz2	2.3 GB
EGAF00000652439	fastq.bz2	1.3 GB
EGAF00000652440	fastq.bz2	1.3 GB
EGAF00000652441	fastq.bz2	1.7 GB
EGAF00000652442	fastq.bz2	1.7 GB
EGAF00000652443	fastq.bz2	4.1 GB
EGAF00000652444	fastq.bz2	4.1 GB
EGAF00000652445	fastq.bz2	4.8 GB
EGAF00000652446	fastq.bz2	4.8 GB
EGAF00000652447	fastq.bz2	3.5 GB
EGAF00000652448	fastq.bz2	3.6 GB
EGAF00000652449	fastq.bz2	2.0 GB
EGAF00000652450	fastq.bz2	2.1 GB
EGAF00000652451	fastq.bz2	2.5 GB
EGAF00000652452	fastq.bz2	2.5 GB
EGAF00000652453	fastq.bz2	1.7 GB
EGAF00000652454	fastq.bz2	1.7 GB
EGAF00000652455	fastq.bz2	2.0 GB
EGAF00000652456	fastq.bz2	2.0 GB
EGAF00000652457	fastq.bz2	3.4 GB
EGAF00000652458	fastq.bz2	3.5 GB
EGAF00000652459	fastq.bz2	5.8 GB
EGAF00000652460	fastq.bz2	5.9 GB
EGAF00000652461	fastq.bz2	1.9 GB
EGAF00000652462	fastq.bz2	1.9 GB
250 Files (1.6 TB)